Index

A

accuracy (bfbrain.BFB_Learner.AL_history attribute) AccuracyNotImproving (class in bfbrain.AL_Metrics) add_metrics() (bfbrain.BFB_Learner.BFBLearner method), [1] AL_history (class in bfbrain.BFB_Learner)

AL_loop() (bfbrain.BFB_Learner.BFBLearner method), [1] ALMetric (class in bfbrain.AL_Metrics) append_data() (bfbrain.Data_Manager.np_data method) append_history() (bfbrain.BFB_Learner.AL_history method)

B

balance_array() (bfbrain.Data_Manager.DataManager method) BALD() (in module bfbrain.Score_Functions) batch_scores (bfbrain.AL_Metrics.PoolMetric attribute) batch_size (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.UnlabelledPredsMetric attribute) BFBLearner (class in bfbrain.BFB_Learner) bfbrain module bfbrain.AL_Metrics module bfbrain.BFB_Learner module bfbrain.Custom_Layers module

bfbrain.Data_Manager module bfbrain.False_Proximity_Test module bfbrain.Hypersphere_Formulas module bfbrain.Jax_Oracle module bfbrain.Potential_Functions module bfbrain.Score_Functions module build() (bfbrain.Custom_Layers.ConcreteDenseDropout method) (bfbrain.Custom_Layers.HypersphereProjectionLayer method)

C

call() (bfbrain.Custom_Layers.ConcreteDenseDropout method) (bfbrain.Custom_Layers.HypersphereProjectionLayer method) check_accuracy_with_better_labeller() (bfbrain.Data_Manager.DataManager method) check_labeller() (bfbrain.Data_Manager.DataManager method) (bfbrain.Data_Manager.labeller_wrapper method) checklam_all() (bfbrain.Data_Manager.DataManager method) combined_false_score() (in module bfbrain.False_Proximity_Test) ConcreteDenseDropout (class in bfbrain.Custom_Layers)

convert_from_polar() (in module bfbrain.Hypersphere_Formulas) convert_from_polar_sym() (in module bfbrain.Hypersphere_Formulas) convert_to_polar() (in module bfbrain.Hypersphere_Formulas) create_data() (bfbrain.Data_Manager.DataManager method) create_dataset() (bfbrain.Data_Manager.DataManager method) create_random_data() (bfbrain.Data_Manager.DataManager method) create_random_lambdas() (bfbrain.Data_Manager.DataManager method) create_seq_network() (in module bfbrain.BFB_Learner) cumprod_sym() (in module bfbrain.Hypersphere_Formulas)

D

data_train (bfbrain.BFB_Learner.BFBLearner attribute) data_val (bfbrain.BFB_Learner.BFBLearner attribute) DataManager (class in bfbrain.Data_Manager) DecisionBoundaryScore (class in bfbrain.AL_Metrics) DeltaFNotDecreasing (class in bfbrain.AL_Metrics)

dm (bfbrain.BFB_Learner.BFBLearner attribute) do_labelling() (bfbrain.Data_Manager.labeller_wrapper method) ds (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.UnlabelledPredsMetric attribute)

F

find_stopping_index() (bfbrain.AL_Metrics.StoppingCondition method) from_config() (bfbrain.Custom_Layers.HypersphereProjectionLayer class method) from_file() (bfbrain.BFB_Learner.BFBLearner class method) (bfbrain.BFB_Learner.BFBLearner method) (bfbrain.Data_Manager.np_data class method)

from_func() (bfbrain.Data_Manager.DataManager class method) FScoreNotImproving (class in bfbrain.AL_Metrics) func (bfbrain.Data_Manager.labeller_wrapper attribute)

G

generate_L() (bfbrain.Data_Manager.DataManager method) get_calibration_uncertainties() (bfbrain.BFB_Learner.BFBLearner method) get_config() (bfbrain.Custom_Layers.ConcreteDenseDropout method) (bfbrain.Custom_Layers.HypersphereProjectionLayer method) get_dropout_regularizer() (in module bfbrain.Custom_Layers) get_false_pos_and_neg_tf() (in module bfbrain.False_Proximity_Test) get_legend() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.NewDataScore method) (bfbrain.AL_Metrics.PoolMetricReduction method) (bfbrain.AL_Metrics.ValidationConfusionMatrix method) (bfbrain.AL_Metrics.ValidationFScore method)

get_metric() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.DecisionBoundaryScore method) (bfbrain.AL_Metrics.MCModelEvaluation method) (bfbrain.AL_Metrics.ModelEvaluation method) (bfbrain.AL_Metrics.NewDataScore method) (bfbrain.AL_Metrics.PoolMetricReduction method) (bfbrain.AL_Metrics.UnlabelledAgreement method) (bfbrain.AL_Metrics.UnlabelledDeltaF method) (bfbrain.AL_Metrics.ValidationConfusionMatrix method) (bfbrain.AL_Metrics.ValidationFScore method) get_weight_regularizer() (in module bfbrain.Custom_Layers)

H

history (bfbrain.BFB_Learner.BFBLearner attribute)

hop_dist (bfbrain.BFB_Learner.BFBLearner attribute) HypersphereProjectionLayer (class in bfbrain.Custom_Layers)

I

idx (bfbrain.BFB_Learner.BFBLearner attribute)

init_for_first_run() (bfbrain.BFB_Learner.BFBLearner class method) (bfbrain.BFB_Learner.BFBLearner method)

J

jax_basinhopping() (in module bfbrain.Jax_Oracle)

jax_convert_from_polar() (in module bfbrain.Hypersphere_Formulas) jax_convert_to_polar() (in module bfbrain.Hypersphere_Formulas)

L

l_constant (bfbrain.BFB_Learner.BFBLearner attribute) label_check (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) label_fn (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) label_func() (in module bfbrain.Jax_Oracle) label_func_do_batch() (in module bfbrain.Jax_Oracle) labeller_wrapper (class in bfbrain.Data_Manager)

lam_len (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) lambdify_mode (bfbrain.Data_Manager.DataManager attribute) lams (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.UnlabelledPredsMetric attribute) lamsym (bfbrain.Data_Manager.DataManager attribute) learning_rate (bfbrain.BFB_Learner.BFBLearner attribute) losses (bfbrain.BFB_Learner.AL_history attribute)

M

Max_Entropy() (in module bfbrain.Score_Functions) MC_call_fast() (in module bfbrain.Score_Functions) MC_call_full() (in module bfbrain.Score_Functions) MCModelEvaluation (class in bfbrain.AL_Metrics) metric_func (bfbrain.AL_Metrics.AccuracyNotImproving attribute) (bfbrain.AL_Metrics.DeltaFNotDecreasing attribute) (bfbrain.AL_Metrics.FScoreNotImproving attribute) (bfbrain.AL_Metrics.ScoreNotDecreasing attribute) (bfbrain.AL_Metrics.StoppingCondition attribute) metric_name (bfbrain.AL_Metrics.AccuracyNotImproving attribute) (bfbrain.AL_Metrics.DeltaFNotDecreasing attribute) (bfbrain.AL_Metrics.FScoreNotImproving attribute) (bfbrain.AL_Metrics.ScoreNotDecreasing attribute) (bfbrain.AL_Metrics.StoppingCondition attribute)

metrics (bfbrain.BFB_Learner.BFBLearner attribute) model (bfbrain.BFB_Learner.BFBLearner attribute) ModelEvaluation (class in bfbrain.AL_Metrics) ModelMetric (class in bfbrain.AL_Metrics) module bfbrain bfbrain.AL_Metrics bfbrain.BFB_Learner bfbrain.Custom_Layers bfbrain.Data_Manager bfbrain.False_Proximity_Test bfbrain.Hypersphere_Formulas bfbrain.Jax_Oracle bfbrain.Potential_Functions bfbrain.Score_Functions

N

n_elements() (bfbrain.Data_Manager.np_data method) n_trials (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolScore attribute) (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.ValidationConfusionMatrix attribute) (bfbrain.AL_Metrics.ValidationFScore attribute) name (bfbrain.AL_Metrics.ALMetric attribute) (bfbrain.AL_Metrics.DecisionBoundaryScore attribute) (bfbrain.AL_Metrics.MCModelEvaluation attribute) (bfbrain.AL_Metrics.ModelEvaluation attribute) (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolDeltaF attribute) (bfbrain.AL_Metrics.PoolScore attribute) (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.UnlabelledPredsMetric attribute) (bfbrain.AL_Metrics.ValidationConfusionMatrix attribute) (bfbrain.AL_Metrics.ValidationFScore attribute)

neg (bfbrain.Data_Manager.np_data attribute) new_pool (bfbrain.AL_Metrics.PoolDeltaF attribute) new_preds (bfbrain.AL_Metrics.PoolDeltaF attribute) NewDataScore (class in bfbrain.AL_Metrics) newer_preds (bfbrain.AL_Metrics.PoolDeltaF attribute) np_data (class in bfbrain.Data_Manager)

O

old_pool (bfbrain.AL_Metrics.PoolDeltaF attribute) old_pool_iter (bfbrain.AL_Metrics.PoolDeltaF attribute)

old_preds (bfbrain.AL_Metrics.PoolDeltaF attribute) (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute)

P

patience (bfbrain.AL_Metrics.AccuracyNotImproving attribute) (bfbrain.AL_Metrics.DeltaFNotDecreasing attribute) (bfbrain.AL_Metrics.FScoreNotImproving attribute) (bfbrain.AL_Metrics.ScoreNotDecreasing attribute) perf_message() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.DecisionBoundaryScore method) (bfbrain.AL_Metrics.MCModelEvaluation method) (bfbrain.AL_Metrics.ModelEvaluation method) (bfbrain.AL_Metrics.NewDataScore method) (bfbrain.AL_Metrics.PoolMetricReduction method) (bfbrain.AL_Metrics.ValidationConfusionMatrix method) (bfbrain.AL_Metrics.ValidationFScore method) performance_check() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.DecisionBoundaryScore method) (bfbrain.AL_Metrics.MCModelEvaluation method) (bfbrain.AL_Metrics.ModelEvaluation method) (bfbrain.AL_Metrics.ModelMetric method) (bfbrain.AL_Metrics.NewDataScore method) (bfbrain.AL_Metrics.PoolDeltaF method) (bfbrain.AL_Metrics.PoolScore method) (bfbrain.AL_Metrics.TrainMetric method) (bfbrain.AL_Metrics.UnlabelledAgreement method) (bfbrain.AL_Metrics.UnlabelledDeltaF method) (bfbrain.AL_Metrics.UnlabelledPredsMetric method) (bfbrain.AL_Metrics.ValidationConfusionMatrix method) (bfbrain.AL_Metrics.ValidationFScore method) (bfbrain.AL_Metrics.ValidationMetric method)

phi_len (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) phisym_var (bfbrain.Data_Manager.DataManager attribute) plot_history() (bfbrain.BFB_Learner.AL_history method) plot_metric() (bfbrain.AL_Metrics.ALMetric method) plot_metrics() (bfbrain.BFB_Learner.BFBLearner method), [1] polar (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) PoolDeltaF (class in bfbrain.AL_Metrics) PoolMetric (class in bfbrain.AL_Metrics) PoolMetricReduction (class in bfbrain.AL_Metrics) PoolScore (class in bfbrain.AL_Metrics) pos (bfbrain.Data_Manager.np_data attribute) Predictive_Variance() (in module bfbrain.Score_Functions) print_status() (bfbrain.AL_Metrics.ALMetric method) process_score_fn() (in module bfbrain.AL_Metrics)

Q

QBDC() (in module bfbrain.Score_Functions)

quant (bfbrain.AL_Metrics.FScoreNotImproving attribute)

R

rand_fraction (bfbrain.BFB_Learner.BFBLearner attribute) rand_nsphere() (in module bfbrain.Hypersphere_Formulas) Random_AL() (in module bfbrain.Score_Functions) record_batch() (bfbrain.AL_Metrics.PoolDeltaF method) (bfbrain.AL_Metrics.PoolMetric method) (bfbrain.AL_Metrics.PoolMetricReduction method) record_score() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.PoolDeltaF method) (bfbrain.AL_Metrics.PoolMetric method) (bfbrain.AL_Metrics.PoolMetricReduction method) red_name (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolMetricReduction attribute)

redefine_model() (bfbrain.BFB_Learner.BFBLearner method), [1] reduction (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolMetricReduction attribute) (bfbrain.AL_Metrics.ScoreNotDecreasing attribute) reset_data() (bfbrain.AL_Metrics.ALMetric method) (bfbrain.AL_Metrics.PoolDeltaF method) (bfbrain.AL_Metrics.PoolMetricReduction method) (bfbrain.AL_Metrics.UnlabelledAgreement method) (bfbrain.AL_Metrics.UnlabelledDeltaF method) rng (bfbrain.Data_Manager.DataManager attribute) (bfbrain.Data_Manager.labeller_wrapper attribute) run_one_step() (in module bfbrain.Jax_Oracle)

S

save_AL_state() (bfbrain.BFB_Learner.BFBLearner method), [1] save_data() (bfbrain.Data_Manager.np_data method) sc_type (bfbrain.AL_Metrics.ALMetric attribute) score_fn (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolScore attribute) (bfbrain.AL_Metrics.ValidationConfusionMatrix attribute) (bfbrain.AL_Metrics.ValidationFScore attribute) ScoreNotDecreasing (class in bfbrain.AL_Metrics) set_l_constant() (bfbrain.BFB_Learner.BFBLearner method), [1] spatial_concrete_dropout() (bfbrain.Custom_Layers.ConcreteDenseDropout method) status_history (bfbrain.AL_Metrics.ALMetric attribute) (bfbrain.AL_Metrics.DecisionBoundaryScore attribute) (bfbrain.AL_Metrics.ModelEvaluation attribute) (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolDeltaF attribute) (bfbrain.AL_Metrics.PoolScore attribute) (bfbrain.AL_Metrics.UnlabelledAgreement attribute) (bfbrain.AL_Metrics.UnlabelledDeltaF attribute) (bfbrain.AL_Metrics.ValidationConfusionMatrix attribute) (bfbrain.AL_Metrics.ValidationFScore attribute)

StoppingCondition (class in bfbrain.AL_Metrics) sym_expr (bfbrain.Data_Manager.DataManager attribute) sym_grad_expr (bfbrain.Data_Manager.DataManager attribute)

T

take_step() (in module bfbrain.Jax_Oracle) test_labeller() (in module bfbrain.Jax_Oracle) tf_score_fn (bfbrain.AL_Metrics.NewDataScore attribute) (bfbrain.AL_Metrics.PoolScore attribute) (bfbrain.AL_Metrics.ValidationConfusionMatrix attribute) (bfbrain.AL_Metrics.ValidationFScore attribute)

tol_dist (bfbrain.AL_Metrics.DecisionBoundaryScore attribute) TrainMetric (class in bfbrain.AL_Metrics)

U

UnlabelledAgreement (class in bfbrain.AL_Metrics)

UnlabelledDeltaF (class in bfbrain.AL_Metrics) UnlabelledPredsMetric (class in bfbrain.AL_Metrics)

V

V_2HDM() (in module bfbrain.Potential_Functions) V_3HDM() (in module bfbrain.Potential_Functions) V_3HDM_U1() (in module bfbrain.Potential_Functions) V_GM() (in module bfbrain.Potential_Functions) V_Precustodial() (in module bfbrain.Potential_Functions) val_accuracy (bfbrain.BFB_Learner.AL_history attribute)

val_losses (bfbrain.BFB_Learner.AL_history attribute) ValidationConfusionMatrix (class in bfbrain.AL_Metrics) ValidationFScore (class in bfbrain.AL_Metrics) ValidationMetric (class in bfbrain.AL_Metrics) Variation_Ratios() (in module bfbrain.Score_Functions) vectorized_minTest() (in module bfbrain.Jax_Oracle)